This example implements the modified Gram-Schmidt orthogonalization method for fully occupied matrices. When used for QR decomposition, the Gram-Schmidt method is less efficient compared to Householder inflections or Givens rotation. But as method to orthogonalize sets of vectors that do not span the whole vector space, it is still the best approach and widely used.
Different implementations are provided both for GPU and CPU, for details see T. Brandes, A. Arnold, T. Soddemann and D. Reith, Eur. Phys. J. ST 210:73-88 (2012).
Code example Gram-Schmidt method (23 KB)
Due to its very small computational cost, the scalar product is certainly 'not' suited for porting to a GPU. However, if a complex algorithm requires a scalar product and the algorithm is ported to a GPU, it is necessary to also port the scalar product to the GPU. Otherwise, one would need to transfer data back to the CPU, which is even more time consuming.
This example demonstrates several possible strategies. It also serves as a good example for the use of atomic operations, and how they can be avoided. e.g. on older hardware. Some of the examples deliberatedly don't work to show the pitfalls of massively parallel computation, and to demonstrate that atomic operations are really necessary. Note that the use of atomic operations is rather slow, and therefore in this example no speed up is gained by using them. However, the use of atomic operations makes the code considerably shorter and easier to read, which is important in a scientific environment, where code is continously developed further.
Code example scalar product (17 KB)
PyCUDA is an extremely powerful Python extension that does not only allow to use CUDA code from Python, but can do just-in-time kernel compilation for you, and allows to write code similiar to numpy, just that it will be executed on a GPU - and much faster therefore. This is an example code calculating again the scalar product, just in Python. Thanks to PyCUDA it is as fast as the plain CUDA code (or even faster, using GPUArray...).
Ideal gas with direct OpenGL visualization
This example uses the CUDA-OpenGL-binding to render an ideal gas in a rotating box. An OpenGL vertex buffer is written directly from CUDA, which runs the ideal gas as a very simple kernel. Of course, the same bindung could also be used to visualize more complex data.
And also this example exists as a Python implementation as well. This requires both PyOpenGL and PyCUDA. It is written for the currently downloadable version of PyCUDA (0.94.2), but doesn't work with the current development version. The necessary changes should be simple to figure out.
This example performs the classical Gauss-Elimination with back substitution to solve a linear equation. It does not perform pivotization, but serves as a simple example for shared memory use.