Publications

This page lists the publications of our working group.

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2011

• Baofu Qiao, Marcello Sega, Christian Holm.
  An atomistic study of a poly(styrene sulfonate)/poly(diallyldimethylammonium) bilayer: the role of surface properties and charge reversal.
  Physical Chemistry Chemical Physics 13(36):16336–16342, 2011.
  [PDF] (4.6 MB) [DOI]
• Bernward A. F. Mann, Olaf Lenz, Kurt Kremer, Christian Holm.
  Hydrogels in Poor Solvents: A Molecular Dynamics Study.
  Macromolecular Theory and Simulations 20(8):721–734, 2011.
  [PDF] (1.7 MB) [DOI]
• Vincent Ballenegger, Joan J. Cerdà, Christian Holm.
  Removal of spurious self-interactions in particle-mesh methods.
  Computer Physics Communications 182(9):1919–1923, 2011.
  [PDF] (208 KB) [DOI]
• Baofu Qiao, Juan J. Cerdà, Christian Holm.
  Atomistic Study of Surface Effects on Polyelectrolyte Adsorption: Case Study of a Poly(styrenesulfonate) Monolayer.
  Macromolecules 44(6):1707–1718, 2011.
  [PDF] (3.6 MB) [DOI]
• Fatemeh Tabatabaei, Olaf Lenz, Christian Holm.
  Simulational study of anomalous tracer diffusion in hydrogels.
  Colloid and Polymer Science 289:523–534, 2011.
  [PDF] (449 KB) [Preprint] [DOI]

2010

• Baofu Qiao, Juan J. Cerdà, Christian Holm.
  Poly(styrenesulfonate)-Poly(diallyldimethylammonium) Mixtures: Toward the Understanding of Polyelectrolyte Complexes and Multilayers via Atomistic Simulations.
  Macromolecules 43(18):7828–7838, 2010.
  [PDF] (2.3 MB) [DOI]
• Alexey Neelov, Christian Holm.
  Interlaced P3M algorithm with analytical and ik-differentiation.
  The Journal of Chemical Physics 132(23):234103, 2010.
  [PDF] (337 KB) [DOI]
• Kai Grass, Christian Holm.
  Mesoscale modelling of polyelectrolyte electrophoresis.
  Faraday Discussions 144:57–70, 2010.
  [PDF] (984 KB) [DOI]
• M. Hecht, J. Harting.
  Implementation of on-site velocity boundary conditions for D3Q19 lattice Boltzmann.
  Journal of Statistical Mechanics: Theory and Experiment 01:P01018, 2010.
  [PDF] (579 KB) [Preprint] [DOI]
• Sandeep Tyagi, Mehmet Süzen, Marcello Sega, Marcia C. Barbosa, Sofia S. Kantorovich, Christian Holm.
  An iterative, fast, linear-scaling method for computing induced charges on arbitrary dielectric boundaries.
  The Journal of Chemical Physics 132(15):154112, 2010.
  [PDF] (267 KB) [DOI]
• Han Wang, Florian Dommert, Christian Holm.
  Optimizing working parameters of the smooth particle mesh Ewald algorithm in terms of accuracy and efficiency.
  The Journal of Chemical Physics 133(3):034117, 2010.
  [PDF] (281 KB) [DOI]
• Florian Dommert, Jochen Schmidt, Christian Krekeler, Yuan Yuan Zhao, Robert Berger, Luigi Delle Site, Christian Holm.
  Towards multiscale modeling of ionic liquids: From electronic structure to bulk properties.
  Journal of Molecular Liquids 152:2–8, 2010.
  [PDF] (990 KB) [DOI]
• Jochen Schmidt, Christian Krekeler, Florian Dommert, Yuanyuan Zhao, Robert Berger, Luigi Delle Site, Christian Holm.
  Ionic Charge Reduction and Atomic Partial Charges from First-Principles Calculations of 1,3-Dimethylimidazolium Chloride.
  The Journal of Physical Chemistry B 114(18):6150–6155, 2010.
  [PDF] (345 KB) [DOI]
• Bastian Schäfer, Martin Hecht, Jens Harting, Hermann Nirschl.
  Agglomeration and filtration of colloidal suspensions with DLVO interactions in simulation and experiment.
  Journal of Colloid and Interface Science 349(1):186–195, 2010.
  [PDF] (755 KB) [Preprint] [DOI]

2009

• Nayaz Khalid Ahmed, Martin Hecht.
  A Lattice Boltzmann Study of Flow Along Patterned Surfaces and Through Channels with Alternating Slip Length.
  In 2009 Fifth International Conference on MEMS NANO, and Smart Systems, pages 109–113.
  2009.
  [PDF] (561 KB) [Preprint] [DOI]
• M. Hecht, J. Harting.
  Using computational steering to explore the parameter space of stability in a suspension.
  In High Performance Computing in Science and Engineering '09. Edited by D. Kröner M. Resch W. Nagel. Part of Transactions of the High Performance Computing Center.
  Springer, 2009.
  [PDF] (628 KB)
• M. Hecht, J. Harting.
  Computational Steering of Cluster Formation in Brownian Suspensions.
  Computers and Mathematics with Applications 58:995–1002, 2009.
  [PDF] (399 KB) [Preprint] [DOI]
• Nayaz Khalid Ahmed, Martin Hecht.
  A boundary condition with adjustable slip length for lattice Boltzmann simulations.
  Journal of Statistical Mechanics 2009(09):P09017, 2009.
  [PDF] (834 KB) [Preprint] [DOI]
• Mehmet Süzen, Marcello Sega, Christian Holm.
  Ensemble inequivalence in single-molecule-experiments.
  Physical Review E 79(5):051118, 2009.
  [PDF] (269 KB) [DOI]
• Taisia Prokopieva, Victor Danilov, Sofia Kantorovich, Christian Holm.
  Ground state structures in ferrofluid monolayers.
  Physical Review E 80(3):031404, 2009.
  [PDF] (616 KB) [DOI]
• Jens Smiatek, Marcello Sega, Christian Holm, Ulf D. Schiller, Friederike Schmid.
  Mesoscopic simulations of the counterion-induced electro-osmotic flow: A comparative study.
  The Journal of Chemical Physics 130(244702), 2009.
  [PDF] (370 KB) [DOI]
• Gil C. Claudio, Kurt Kremer, Christian Holm.
  Comparison of a hydrogel model to the Poisson-Boltzmann cell model.
  The Journal of Chemical Physics 131(9):094903, 2009.
  [PDF] (453 KB) [DOI]
• Vincent Ballenegger, Axel Arnold, Joan J. Cerdà.
  Simulations of non-neutral slab systems with long-range electrostatic interactions in two-dimensional periodic boundary conditions.
  The Journal of Chemical Physics 131(9):094107, 2009.
  [PDF] (204 KB) [DOI]
• Juan J. Cerdà, Tomás Sintes, Raúl Toral.
  Spherical brushes within spherical cavities: A self-consistent field and Monte Carlo study.
  The Journal of Chemical Physics 131(13):134901, 2009.
  [PDF] (286 KB) [DOI]
• Juan J. Cerdà, Baofu Qiao, Christian Holm.
  Understanding polyelectrolyte multilayers: an open challenge for simulations.
  Soft Matter 5:4412–4425, 2009.
  [PDF] (1.7 MB) [DOI]
• Juan J. Cerdà, Baofu Qiao, Christian Holm.
  Modeling strategies for polyelectrolyte multilayers.
  European Journal of Physics Special Topics 177(1):129–148, 2009.
  [PDF] (971 KB) [DOI]

2008

• Axel Arnold, Christian Holm.
  Interactions of like-charged rods at low temperatures: Analytical theory vs. simulations.
  European Physical Journal E 27(1):21–29, 2008.
  [PDF] (343 KB) [DOI]
• Vincent Ballenegger, Joan J. Cerdà, Olaf Lenz, Christian Holm.
  The optimal P3M algorithm for computing electrostatic energies in periodic systems.
  The Journal of Chemical Physics 128(3):034109, 2008.
  [PDF] (426 KB) [Preprint] [DOI]
• Juan J. Cerdà, Sofia Kantorovich, Christian Holm.
  Aggregate formation in ferrofluid monolayers: simulations and theory.
  Journal of Physics: Condensed Matter 20(20):204125, 2008.
  [PDF] (342 KB) [DOI]
• Juan J. Cerdà, Vincent Ballenegger, Olaf Lenz, Christian Holm.
  P³M algorithm for dipolar interactions.
  The Journal of Chemical Physics 129:234104, 2008.
  [PDF] (516 KB) [Preprint] [DOI]
• Juan J. Cerdà, Tomás Sintes, C. Holm, C. M. Sorensen, A. Chakrabarti.
  Shear effects on crystal nucleation in colloidal suspensions.
  Physical Review E 78(3):031403, 2008.
  [PDF] (1001 KB) [DOI]
• Florian Dommert, Jochen Schmidt, Baofu Qiao, Yuanyuan Zhao, Christian Krekeler, Luigi Delle Site, Robert Berger, Christian Holm.
  A comparative study of two classical force fields on statics and dynamics of [EMIM][BF₄] investigated via molecular dynamics simulations.
  The Journal of Chemical Physics 129(22):224501, 2008.
  [PDF] (642 KB) [DOI]
• Kai Grass, Ute Böhme, Ulrich Scheler, Hervé Cottet, Christian Holm.
  Importance of Hydrodynamic Shielding for the Dynamic Behavior of Short Polyelectrolyte Chains.
  Physical Review Letters 100(9):096104, 2008.
  [PDF] (115 KB) [DOI]
• Christof Gutsche, Friedrich Kremer, Matthias Krüger, Markus Rauscher, Rudolf Weeber, Jens Harting.
  Colloids dragged through a polymer solution: experiment, theory and simulation.
  The Journal of Chemical Physics 129(8):084902, 2008.
  [PDF] (786 KB) [Preprint] [DOI]
• J. Harting, H. J. Herrmann, E. Ben-Naim.
  Anomalous distribution functions in sheared suspensions.
  Europhysics Letters 83(3):30001, 2008.
  [PDF] (282 KB) [Preprint] [DOI]
• J. Harting, C. Kunert.
  Boundary effects in microfluidic setups.
  In NIC Symposium 2008, pages 221–228. Edited by G. Münster, D. Wolf, M. Kremer. Part of NIC series, volume 39.
  2008. ISBN: 978-3-9810843-5-1.
  [PDF] (472 KB) [URL]
• Jens Harting, Christian Kunert, Jari Hyväluoma.
  Lattice Boltzmann simulations in microfluidics: probing the boundary condition.
  Microfluidics and Nanofluidics 8(1), 2008.
  Proceedings of the 1st European Conference on Microfluidics - Microfluidics 2008
  [PDF] (840 KB) [Preprint] [DOI]
• J. Harting, T. Zauner, R. Weeber, R. Hilfer.
  Flow in porous media and driven colloidal suspensions.
  2008.
  [PDF] (594 KB)
• H. J. Herrmann, J. Harting, M. Hecht, E. Ben-Naim.
  Simulation of dense colloids.
  Brazilian Journal of Physics 38:37, 2008.
  [PDF] (399 KB)
• R. Hilfer.
  Threefold Introduction to Fractional Derivatives.
  In Anomalous Transport: Foundations and Applications, chapter 1. Edited by R. Klages et al..
  Wiley-VCH, Weinheim, 2008.
  ISBN-10: 3-527-40722-7
  [PDF] (530 KB)
• Jari Hyväluoma, Jens Harting.
  Slip flow over structured surfaces with entrapped microbubbles.
  Physical Review Letters 100(24):246001, 2008.
  [PDF] (233 KB) [Preprint] [DOI]
• Sofia Kantorovich, Juan J. Cerdà, Christian Holm.
  Microstructure analyisis of monodisperse ferrofluid monolayers: theory and simulation.
  Physical Chemistry Chemical Physics 10(14):1883–1895, 2008.
  [PDF] (1.3 MB) [DOI]
• Christian Kunert, Jens Harting.
  On the effect of surfactant adsorption and viscosity change on apparent slip in hydrophobic microchannels.
  Progress in Computational Fluid Dynamics 8(1/2/3/4):197, 2008.
  [PDF] (432 KB) [Preprint] [DOI]
• C. Kunert, J. Harting.
  Simulation of fluid flow in hydrophobic rough microchannels.
  In International Journal of Computational Fluid Dynamics, pages 475. Volume 22.
  2008.
  [PDF] (118 KB) [Preprint] [DOI]
• Olaf Lenz, Christian Holm.
  Simulation of charge reversal in salty environments: Giant overcharging?
  European Physical Journal E 26:191–195, 2008.
  [PDF] (309 KB) [Preprint] [DOI]
• P. G. Lind.
  The network approach: basic concepts and algorithms.
  2008.
  to appear in Lectures on Socio- and Econophysics J.Schneider and C.Hirtreiter, Springer, 2008; arXiv:0711.3972
  
• P. G. Lind, H. J. Herrmann.
  Approaches from statistical physics to model and study social networks.
  In Statistical Mechanics Research. Edited by Byung-Soo Kim.
  Nova Publishers, 2008.
  in press
  
• Pedro G. Lind, Reza M. Baram, Hans J. Herrmann.
  Obtaining the size distributions of fault gouges with polydisperse bearings.
  Physical Review E 77(2):021304, 2008.
  [PDF] (342 KB) [Preprint] [DOI]
• Baofu Qiao, Christian Krekeler, Robert Berger, Luigi Delle Site, Christian Holm.
  Effect of Anions on Static Orientational Correlations, Hydrogen Bonds, and Dynamics in Ionic Liquids: A Simulational Study.
  The Journal of Physical Chemistry B 112(6):1743–1751, 2008.
  [PDF] (361 KB) [DOI]
• H. J. Seybold, R. Hilfer.
  Numerical Algorithm for Calculating the Generalized Mittag-Leffler Function.
  SIAM Journal on Numerical Analysis 47(1):69–88, 2008.
  [PDF] (1.3 MB) [DOI]

2007

• Dmytro Antypov, Christian Holm.
  Osmotic Coefficient Calculations for Dilute Solutions of Short Stiff-Chain Polyelectrolytes.
  Macromolecules 40(3):731–738, 2007.
  [PDF] (182 KB) [DOI]
• B. Biswal, P. E. Øren, S. Bakke, R. J. Held, R. Hilfer.
  Stochastic multiscale model for carbonate rocks.
  Physical Review E 75(6):061303, 2007.
  [PDF] (364 KB) [DOI]
• R. Bürger, A. Narváez.
  Steady-state, control, and capacity calculations for flocculated suspensions in clarifier-thickeners.
  International Journal of Mineral Processing 84(1–4):274–298, 2007.
  [DOI]
• O. Durán, H. J. Herrmann, L. P. Maia.
  Evolution of Parabolic dunes in the northeastern Brazil.
  2007.
  in preparation
  
• O. Durán, V. Schwämmle, H. J. Herrmann.
  Barchan dune's size distribution induced by collisions.
  2007.
  submitted to Geophys. Res. Lett.; e-print: cond-mat/0701370
  
• O. Durán, V. Schwämmle, P. G. Lind, H. J. Herrmann.
  How barchan dunes distribute over desert.
  2007.
  submitted to PRL; e-print: cond-mat/0701367
  
• M. C. Gonzaléz, H. J. Herrmann, J. Kertész, T. Vicsek.
  Community structure and ethnic preferences in school friendship networks.
  Physica A , 2007.
  [Preprint] [DOI]
• J. Harting, G. Giupponi.
  Lattice Boltzmann simulations of microemulsions and binary immiscible fluids under shear.
  In High Performance Computing in Science and Engineering '07, pages 457–470. Edited by Dietmar Kröner Wolfgang E. Nagel, Michael Resch.
  Springer, 2007.
  [PDF] (476 KB) [DOI]
• J. Harting, G. Giupponi, P. V. Coveney.
  Structural transitions and arrest of domain growth in sheared binary immiscible fluids and microemulsions.
  Physical Review E 75:041504, 2007.
  Within this project we received the HLRS Golden Spike Award in 2006
  [PDF] (829 KB) [Preprint]
• J. Harting, M. Hecht, C. Kunert, R. Weeber.
  Mesoscopic simulations of particle-laden flows.
  inSide 5(2):7, 2007.
  [PDF] (470 KB)
• M. Hecht.
  Simulation of Peloids.
  PhD thesis, Universität Stuttgart, Germany, 2007.
  [PDF] (2.8 MB) [URL]
• M. Hecht, J. Harting.
  Structural Transitions in Colloidal Suspensions.
  In High Performance Computing in Science and Engineering '07, pages 45–65. Edited by Dietmar Kröner Wolfgang E. Nagel, Michael Resch.
  Springer, 2007.
  [PDF] (358 KB) [DOI]
• M. Hecht, J. Harting, H. J. Herrmann.
  Formation and growth of clusters in colloidal suspensions.
  International Journal of Modern Physics C 18(4):501–510, 2007.
  [PDF] (633 KB) [Preprint] [DOI]
• M. Hecht, J. Harting, H. J. Herrmann.
  Stability Diagram for Dense Suspensions of Model Colloidal Al2O3-Particles in Shear Flow.
  Physical Review E 75(5):051404, 2007.
  [PDF] (401 KB) [Preprint] [DOI]
• Berk Hess, Mehmet Sayar, Christian Holm.
  Stability of Hydrophobically Modified Poly(p-phenylene)sulfonate Bundles as Observed by Molecular Dynamics Simulation.
  Macromolecules 40(5):1703-1707, 2007.
  [PDF] (239 KB) [DOI]
• Alexey O. Ivanov, Sofia S. Kantorovich, Evgeniy N. Reznikov, Christian Holm, Alexander F. Pshenichnikov, Alexander V. Lebedev, Alexandros Chremos, Philip J. Camp.
  Magnetic properties of polydisperse ferrofluids: A critical comparison between experiment, theory and computer simulation.
  Physical Review E 75(6):061405, 2007.
  [PDF] (339 KB) [DOI]
• Christian Kunert, Jens Harting.
  Roughness Induced Boundary Slip in Microchannel Flows.
  Physical Review Letters 99(17):176001, 2007.
  [PDF] (241 KB) [DOI]
• N. Levin, H. Tsoar, L. P. Maia, V. Claudino-Sales, H. J. Herrmann, O. Durán.
  Modeling the formation of vegetated arcuate marks behind barchan dunes in NE Brazil.
  2007.
  submitted
  
• P. G. Lind, J. S. Andrade Jr., L. R. da Silva, H. J. Herrmann.
  Spreading gossip in social networks.
  Physical Review E 76:036117, 2007.
  [Preprint]
• P. G. Lind, J. S. Andrade Jr., L. R. da Silva, H. J. Herrmann.
  The spread of gossip in American schools.
  Europhysics Letters 78:68005, 2007.
  [Preprint]
• P. G. Lind, H. J. Herrmann.
  New approaches to model and study social networks.
  New Journal of Physics 9:228, 2007.
  [Preprint]
• P. G. Lind, A. Mora, Jason A. C. Gallas, M. Haase.
  Minimizing stochasticity in the NAO index.
  International Journal of Bifurcation and Chaos 17((10)):3461–3466, 2007.
  
• Vladimir Lobaskin, Burkhard Dünweg, Martin Medebach, Thomas Palberg, Christian Holm.
  Electrophoresis of Colloidal Dispersions in the Low-Salt Regime.
  Physical Review Letters 98:176105, 2007.
  [PDF] (169 KB) [DOI]
• E. J. R. Parteli, O. Durán, H. J. Herrmann.
  Minimal size of a barchan dune.
  Physical Review E 75:011301, 2007.
  
• E. J. R. Parteli, O. Durán, V. Schwämmle, H. J. Herrmann, H. Tsoar.
  Modeling seif dunes.
  2007.
  preprint
  
• E. J. R. Parteli, H. J. Herrmann.
  Saltation transport on Mars.
  Physical Review Letters 98:198001, 2007.
  [PDF] (231 KB)
• M. Sayar, C. Holm.
  Finite Size Polyelectrolyte Bundles at Thermodynamic Equilibrium.
  Europhysics Letters 77:16001, 2007.
  [PDF] (328 KB) [Preprint] [DOI]
• Sandeep Tyagi, Axel Arnold, Christian Holm.
  ICMMM2D: An accurate method to include planar dielectric interfaces via image charge summation.
  The Journal of Chemical Physics 127(15):154723, 2007.
  [PDF] (305 KB) [DOI]

2006

• M. P. Almeida, J. S. Andrade Jr., H. J. Herrmann.
  Aeolian transport layer.
  Physical Review Letters (1):018001, 2006.
  [Preprint]
• Dmytro Antypov, Christan Holm.
  Optimal cell approach to osmotic properties of finite stiff-chain polyelectrolytes.
  Physical Review Letters 96:088302, 2006.
  [PDF] (163 KB) [DOI]
• L. de Arcangelis, C. P. Capano, H. J. Herrmann.
  Self-organized criticality model for brain plasticity.
  Physical Review Letters 96:028107, 2006.
  also in Virt. J. of Biol. Phys., Feb. 1 2006; e-print: cond-mat/0411573; e-print: q-bio.NC/0411043
  
• Axel Arnold, Bernward A. Mann, Christian Holm.
  Simulating Charged Systems with ESPResSo.
  In Computer Simulations in Condensed Matter: from Materials to Chemical Biology, pages 193–222. Edited by Mauro Ferrario, Giovanni Ciccotti, Kurt Binder. Part of Lecture Notes in Physics, volume 703.
  Springer, Berlin, Germany, 2006. ISBN: 3-540-35273-2.
  [PDF] (1.3 MB) [DOI]
• B. Biswal, B. R. Niranjan, G. Ullal, C. Dasgupta.
  Computational modeling of the dependence of kindling rate on network properties.
  Physica A: Statistical Mechanics and its Applications 364:565–580, 2006.
  [PDF] (295 KB)
• F. Boettcher, J. Peinke, D. Kleinhans, R. Friedrich, P. G. Lind, M. Haase.
  Reconstruction of complex dynamical systems affected by strong measurement noise.
  Physical Review Letters 97:090603, 2006.
  [Preprint]
• R. Bürger, F. Concha, K. Karlsen, A. Narváez.
  Numerical simulation of clarifier-thickener units treating ideal suspensions with a flux density function having two inflection points.
  Mathematical and Computer Modelling 44:255–275, 2006.
  
• O. Durán, H. J. Herrmann.
  Modelling of saturated sand flux.
  Journal of Statistical Mechanics 2006(07):P07011, 2006.
  [DOI]
• O. Durán, H. J. Herrmann.
  Vegetation against dune mobility.
  Physical Review Letters 97:188001, 2006.
  [Preprint]
• E. Gerolymatou, I. Vardoulakis, R. Hilfer.
  Modeling Infiltration by Means of a Fractional Diffusion Equation.
  Journal of Physics D 39:4104–4110, 2006.
  [PDF] (443 KB)
• E. Gerolymatou, I. Vardoulakis, R. Hilfer.
  Modelling infiltration by means of a nonlinear fractional diffusion model.
  Journal of Physics D 39:4104–4110, 2006.
  [PDF] (443 KB)
• G. Giupponi, J. Harting, P. V. Coveney.
  Emergence of rheological properties in lattice Boltzmann simulations of gyroid mesophases.
  Europhysics Letters 73:533–539, 2006.
  [PDF] (248 KB) [Preprint]
• M. C. Gonzaléz, P. G. Lind, H. J. Herrmann.
  A system of mobile agents to model social networks.
  Physical Review Letters 96:088702, 2006.
  [Preprint]
• M. C. Gonzaléz, P. G. Lind, H. J. Herrmann.
  Model of mobile agents for sexual interactions networks.
  European Physical Journal B 49:371–376, 2006.
  [Preprint]
• M. C. Gonzaléz, P. G. Lind, H. J. Herrmann.
  Networks based on collisions among mobile agents.
  Physica D 224:137–148, 2006.
  [Preprint]
• M. C. Gonzaléz, A. O. Sousa, H. J. Herrmann.
  Renormalizing Sznajd model on complex networks taking into account the effects of growth mechanisms.
  EPJ B 49:253–257, 2006.
  [Preprint]
• K. Gupta, H. P. Singh, B. Biswal, R. Ramaswamy.
  Adaptive targeting of chaotic response in periodically stimulated neural systems.
  Chaos: An Interdisciplinary Journal of Nonlinear Science 16(2):023116, 2006.
  [PDF] (150 KB)
• J. Harting, G. Giupponi.
  Rheological properties of binary and ternary amphiphilic fluid mixtures.
  In High Performance Computing in Science and Engineering '06. Edited by W. Jäger M. Resch W. Nagel. Part of Transactions of the High Performance Computing Center.
  Springer, 2006.
  [PDF] (245 KB)
• J. Harting, M. Hecht, H. J. Herrmann.
  Simulation of particle suspensions at the Institute for Computational Physics.
  In High Performance Computing in Science and Engineering '06. Edited by W. Jäger M. Resch W. Nagel. Part of Transactions of the High Performance Computing Center.
  Springer, 2006.
  [PDF] (245 KB)
• J. Harting, M. Hecht, H. J. Herrmann, S. McNamara.
  Computer simulation of particle suspensions.
  Multifield Problems in Solid and Fluid Mechanis, Lecture Notes in Applied and Computational Mechanics 28, Springer , 2006.
  [PDF] (604 KB) [Preprint]
• J. Harting, A. Komnik, H. J. Herrmann.
  Lattice-Boltzmann Simulations of Transport Phenomena and Structuring in Suspensions.
  In Behavior of Granular Media. Edited by P. Walzel, S. Linz, Ch. Krülle, R. Grochowski.
  Shaker, 2006.
  [PDF] (87 KB)
• J. Harting, C. Kunert, H. J. Herrmann.
  Lattice Boltzmann simulations of apparent slip in hydrophobic microchannels.
  Europhysics Letters 75:328–334, 2006.
  [PDF] (162 KB) [Preprint] [DOI]
• M. Hecht, J. Harting, M. Bier, J. Reinshagen, H. J. Herrmann.
  Shear Viscosity of Clay-like Colloids in Computer Simulations and Experiments.
  Physical Review E 74(2):021403, 2006.
  [PDF] (332 KB) [Preprint] [DOI]
• H. J. Herrmann.
  Matrix Retina: Wie Bilder im Gehirn verarbeitet ind gespeichert werden.
  In Iconic Worlds, pages 60–66. Edited by C. Maar, H. Burda.
  Dumont, 2006.
  
• H. J. Herrmann, R. Mahmoodi-Baram, M. Wackenhut.
  Dense Packings.
  Brazilian Journal of Physics 36:610–613, 2006.
  Proceedings of conference in Ouro Preto
  
• Berk Hess, Christian Holm, Nico van der Vegt.
  Modeling multi-body effects in ionic solutions with a concentration dependent dielectric permittivity.
  Physical Review Letters 96:147801, 2006.
  [PDF] (115 KB) [DOI]
• Berk Hess, Christian Holm, Nico van der Vegt.
  Osmotic Coeffcients of atomistic NaCl (aq) force-fields.
  The Journal of Chemical Physics 124:164509, 2006.
  [PDF] (354 KB) [DOI]
• R. Hilfer.
  Capillary Pressure, Hysteresis and Residual Saturation in Porous Media.
  Physica A 359:119–128, 2006.
  [PDF] (167 KB)
• R. Hilfer.
  Macroscopic Capillarity and Hysteresis for Flow in Porous Media.
  Physical Review E 73:016307, 2006.
  [PDF] (135 KB)
• R. Hilfer.
  Macroscopic capillarity without a constitutive capillary pressure function.
  Physica A 371:209–225, 2006.
  [PDF] (297 KB)
• R. Hilfer, H. J. Seybold.
  Computation of the Generalized Mittag-Leffler Function and its Inverse in the Complex Plane.
  Integral Transforms and Special Functions 17(9):637–652, 2006.
  [PDF] (2.3 MB)
• R Hilfer, HJ Seybold.
  Computation of the generalized Mittag-Leffler function and its inverse in the complex plane.
  Integral Transforms and Special Functions 17(9):637–652, 2006.
  [PDF] (2.3 MB)
• Christian Holm, Alexey Ivanov, Sofia Kantorovich, Elena Pyanzina, Evgeniy Reznikov.
  Equilibrium properties of a bidisperse ferrofluid with chain aggregates: theory and computer simulations.
  Journal of Physics: Condensed Matter 18(38):S2737–S2756, 2006.
  [PDF] (1.0 MB) [DOI]
• Christian Holm, Alexey Ivanov, Sofia Kantorovich, Elena Pyanzina.
  Polydispersity influence upon magnetic properties of aggregated ferrofluids.
  Zeitschrift für Physikalische Chemie 220:105–115, 2006.
  [PDF] (261 KB) [DOI]
• F. Kun, R. C. Hidalgo, F. Raischel, H. J. Herrmann.
  Extension of fibre bundle models for creep rupture and interface failure.
  International Journal of Fracture 140:255–265, 2006.
  
• F Kun, FK Wittel, HJ Herrmann, BH Kröplin, KJ Måløy.
  Scaling Behavior of Fragment Shapes.
  Physical Review Letters 96(2):025504, 2006.
  [Preprint]
• H. J. Limbach, A. Arnold, B. A. Mann, C. Holm.
  ESPResSo – An Extensible Simulation Package for Research on Soft Matter Systems.
  Computer Physics Communications 174(9):704–727, 2006.
  [PDF] (318 KB) [DOI]
• P. G. Lind, A. Nunes, Jason A. C. Gallas.
  Impact of bistability in the synchronization of chaotic maps with delayed coupling.
  Physica A 371:100–103, 2006.
  [Preprint]
• Bernward Mann, Christian Holm, Kurt Kremer.
  The Swelling Behaviour of Charged Hydrogels.
  Macromolecular Symposia 237:90–107, 2006.
  [PDF] (563 KB) [DOI]
• S. McNamara, M. Strauß, F. Zeller, H. J. Herrmann.
  Simulations of dense-phase pneumatic conveying.
  In Behavior of Granular Media, pages 17–23. Edited by P. Walzel, S. Linz, Ch. Krülle, R. Grochowski. Part of Schriftenreihe Mechanische Verfahrenstechnik, volume 9.
  Shaker Verlag, Aachen, 2006. ISBN: 978-3-8322-5524-4.
  [URL]
• Frank Mühlbacher, Christian Holm, Helmut Schiessel.
  Controlled DNA compaction within chromatin: The tail-bridging effect.
  Europhysics Letters 73(1):135–141, 2006.
  [PDF] (273 KB) [DOI]
• Frank Mühlbacher, Helmut Schiessel, Christian Holm.
  Tail-induced attraction between nucleosome core particles.
  Physical Review E 74:031919, 2006.
  [PDF] (811 KB) [DOI]
• E. J. R. Parteli, O. Durán, H. J. Herrmann.
  The shape of the Barchan Dunes in the Arkhangelsky Crater on Mars.
  In Proceedings of "Lunar and Planetary Science XXXVII", pages 1827.
  2006.
  
• E. J. R. Parteli, V. Schwämmle, H. J. Herrmann, L. H. U. Monteiro, L. P. Maia.
  Profile measurement and simulation of a transverse dune field in the Lençóis Maranhenses.
  Geomorphology 81:29–42, 2006.
  [PDF] (1.3 MB) [Preprint] [DOI]
• D. R. Paula, A. D. Araújo, S. Andrade Jr., H. J. Herrmann, J. A. C. Gallas.
  Periodic neural activity induced by network complexity.
  Physical Review E 74(1):017102, 2006.
  also in Virt. J. of Biol. Phys., August 1, 2006
  [PDF] (88 KB) [Preprint] [DOI]
• F. Raischel, F. Kun, H. J. Herrmann.
  Fiber bundle models for composite materials.
  In Conference on Damage in Composite Materials.
  2006.
  
• Frank Raischel, Ferenc Kun, Hans J. Herrmann.
  Local load sharing fiber bundles with a lower cutoff of strength disorder.
  Physical Review E 74(3):035104 (R), 2006.
  [PDF] (425 KB) [Preprint] [DOI]
• F. Raischel, F. Kun, R. C. Hidalgo, H. J. Herrmann.
  Statistical Damage Models: Fiber Bundle Models.
  In Damage and its Evolution in Fiber-Composite Materials: Simulation and Non-Destructive Evaluation, pages 443–471.
  Universität Stuttgart, 2006.
  
• V. Schatz, H. Tsoar, K. S. Edgett, E. J. R. Parteli, H. J. Herrmann.
  Evidence for indurated sand dunes in the Martian north polar region.
  Journal of Geophysical Research 111(E4):E04006, 2006.
  doi:10.1029/2005JE002514; also as abstract for EGU-2005
  [DOI]
• V. Schwämmle.
  Phase transition in a sexual age-structured model of learning foreign languages.
  International Journal of Modern Physics C 17(1):103–111, 2006.
  [Preprint]
• V. Schwämmle, E. Brigatti.
  Speciational view of macroevolution: Are micro and macroevolution decoupled?
  Europhysics Letters 75:342–348, 2006.
  [Preprint] [DOI]
• V. Schwämmle, K. Luz-Burgoa, S. M. de Oliveira, J. S. Sá Martins.
  Phase transition in a mean-field model for sympatric speciation.
  Physica A 369(2):612–618, 2006.
  [Preprint]
• V. Schwämmle, A. O. Sousa, S. M. de Oliveira.
  Monte Carlo Simulations of Parapatric Speciation.
  European Physical Journal B: Condensed Matter Physics 51:563–570, 2006.
  [Preprint] [DOI]
• M. Strauss, H. J. Herrmann, S. McNamara, G. Niederreiter, K. Sommer.
  Plug conveying in a vertical tube.
  Powder Technology 162:16–26, 2006.
  [Preprint]
• Mikhail R. Stukan, Vladimir A. Lobaskin, Christian Holm, Olga I. Vinogradova.
  Spatial distribution of polyelectrolyte and counterions in nanocapsules: A computer simulation study.
  Physical Review E 73:021801, 2006.
  [PDF] (616 KB) [DOI]
• Sandeep Tyagi.
  Evaluation of Coulomb potential in a triclinic cell with periodic boundary conditions.
  Molecular Physics 104:2433–2438, 2006.
  
• Sandeep Tyagi.
  Logarithmic interaction under periodic boundary conditions: closed form formulas for energy and forces.
  Molecular Physics 104:359–363, 2006.
  

2005

• M. Alam, V. H. Arakeri, P. R. Nott, J. D. Goddard, H. J. Herrmann.
  Instability-induced ordering, universal unfolding and the role of gravity in granular Couette flow.
  Journal of Fluid Mechanics 523:277–306, 2005.
  [PDF] (854 KB)
• R. F. S. Andrade, H. J. Herrmann.
  Magnetic models on Apollonian networks.
  Physical Review E 71:056131, 2005.
  [Preprint]
• Dmytro Antypov, Marcia C. Barbosa, Christian Holm.
  A simple non-local approach to treat size correlations within Poisson-Boltzmann theory.
  Physical Review E 71:061106, 2005.
  [PDF] (138 KB)
• Axel Arnold, Christian Holm.
  Efficient methods to compute long range interactions for soft matter systems.
  In Advanced Computer Simulation Approaches for Soft Matter Sciences II, pages 59–109. Edited by C. Holm, K. Kremer. Part of Advances in Polymer Science.
  Springer, Berlin, 2005. ISBN: 9783540260912.
  [PDF] (1.1 MB) [DOI]
• Axel Arnold, Christian Holm.
  MMM1D: A method for calculating electrostatic interactions in one-dimensional periodic geometries.
  The Journal of Chemical Physics 123(12):144103, 2005.
  [PDF] (122 KB) [DOI]
• B. Behera, F. Kun, S. McNamara, H. J. Herrmann.
  Fragmentation of a circular disc by impact on a frictionless plate.
  Journal of Physics: Condensed Matter 17:S2439–S2456, 2005.
  [Preprint]
• B. Behera, F. Kun, S. McNamara, H. J. Herrmann.
  Fragmentation of a circular disc by projectiles.
  cond-mat 0404057, 2005.
  submitted to Euro.Phys.J.B
  
• C. T. David, R. García-Rojo, H. J. Herrmann, S. Luding.
  Hysteresis and creep in powders and grains.
  In Proceedings of Powders and Grains 2005, pages 291–294. Edited by R. Garcia-Rojo, H. J. Herrmann, S. McNamara.
  Balkema, Leiden, 2005.
  [PDF] (1.4 MB)
• O. Durán, V. Schatz, H. J. Herrmann, H. Tsoar.
  Transformation of Barchans into Parabolic Dunes under the Influence of Vegetation.
  In Proceedings of Powders and Grains 2005, pages 951–954,. Edited by R. Garcia-Rojo, H. J. Herrmann, S. McNamara.
  Balkema, Leiden, 2005.
  [Preprint]
• O. Durán, V. Schwämmle, H. J. Herrmann.
  Breeding and Solitary Wave Behavior of Dunes.
  Physical Review E 72:021308, 2005.
  [Preprint]
• F. Fonseca, H. J. Herrmann.
  Simulation of the sedimentation of a falling oblate ellipsoid.
  Physica A 345:341–355, 2005.
  [Preprint]
• Jason A. C. Gallas, H. J. Herrmann.
  Spontaneous emergence of spatio-temporal order in class 4 automata.
  Physica A 356:78–82, 2005.
  [Preprint]
• E. Gerolymatou, I. Vardoulakis, R. Hilfer.
  Simulating the Saturation Front Using a Fractional Diffusion Model.
  In Proceedings of the GRACM05 International Congress on Computational Mechanics, Limassol 2005, pages 653. Edited by Georgios Georgiou, Panos Papanastasiou, Manolis Papadrakakis.
  GRACM, Athens, 2005. ISBN: 9963-644-51-1.
  [PDF] (486 KB)
• G. González, P. G. Lind, H. J. Herrmann.
  Model of mobile agents for sexual interaction networks.
  physics 0508145, 2005.
  submitted to EPJB
  
• M. C. Gonzaléz, H. J. Herrmann, A. D. Araújo.
  Cluster size distribution of infection in a system of mobile agents.
  Physica A 356:100–106, 2005.
  proceedings of Medyfinol in La Serena
  [PDF] (244 KB) [Preprint]
• J. Harting, J. Chin, M. Venturoli, P. V. Coveney.
  Large-scale lattice Boltzmann simulations of complex fluids: advances through the advent of computational grids.
  Philosophical Transactions of the Royal Society of London, Series A: Mathematical, Physical and Engineering Sciences 363:1895–1915, 2005.
  [PDF] (2.9 MB) [Preprint] [DOI]
• M. Hecht, J. Harting, T. Ihle, H. J. Herrmann.
  Simulation of Claylike Colloids.
  Physical Review E 72:011408, 2005.
  [PDF] (438 KB) [Preprint] [DOI]
• Olaf Herbst, R. Cafiero, A. Zippelius, H. J. Herrmann, S. Luding.
  A driven two-dimensional granular gas with Coulomb friction.
  cond-mat 0501223, 2005.
  
• H. J. Herrmann.
  Dune formation.
  In Encyclopedia of Nonlinear Science, pages 238–240. Edited by A. Scott.
  Routledge, 2005.
  [PDF] (55 KB)
• H. J. Herrmann.
  Spuren im Sand.
  Physik Journal 4:57–60, 2005.
  [PDF] (280 KB)
• H. J. Herrmann, J. S. Andrade Jr., V. Schatz, G. Sauermann, E. J. R. Parteli.
  Calculation of the separation streamlines of barchans and transverse dunes.
  Physica A 357:44–49, 2005.
  [Preprint]
• H. J. Herrmann, O. Durán, E. J. R. Parteli, V. Schatz.
  Vegetation and induration as sand dunes stabilizators.
  Journal of Coastal Research , 2005.
  special issue: proceedings of ICS 2005
  
• H. J. Herrmann, E. J. R. Parteli, V. Schwämmle, L. H. U. Monteiro, L. P. Maia.
  The coastal dunes of the Lencois Maranhenses.
  Journal of Coastal Research , 2005.
  special issue: proceedings of ICS 2005
  
• H. J. Herrmann, G. Sauermann, V. Schwämmle.
  The morphology of dunes.
  Physica A 358:30–38, 2005.
  proceedings Marrakesch
  [PDF] (303 KB)
• H. J. Herrmann, V. Schatz.
  Numerical methods for aeolian transport.
  In Computer Methods in Mechanics 2005, pages 13–14. Edited by B. Mochnacki A. Garstecki, N. Sczygiol.
  Czestochowa, 2005.
  [PDF] (163 KB)
• R. C. Hidalgo, F. Kun, H. J. Herrmann.
  Slow relaxation of fiber composites, variable range of interaction approach.
  Physica A 347:402–410, 2005.
  [PDF] (368 KB)
• R. Hilfer.
  Applications of Fractional Calculus in Physics.
  SICAM 1:97, 2005.
  [PDF] (110 KB)
• R. Hilfer, B. Biswal, H. G. Mattutis, W. Janke.
  Multicanonical Simulations of the Tails of the Order-Parameter Distribution of the two-dimensional Ising Model.
  Computer Physics Communications 169:230, 2005.
  [PDF] (260 KB)
• Christian Holm.
  The Physics of Overcharging.
  In Traffic and Granular Flow '03, pages 475–488. Edited by S. P. Hoogendoorn, S. Luding, P. H. L. Bovy, M. Schreckenberg, D. E. Wolf.
  Springer Berlin Heidelberg, 2005. ISBN: 978-3-540-25814-8.
  [PDF] (166 KB) [DOI]
• Christian Holm, Jean-Jacque Weis.
  The Structure of Ferrofluids: A Status Report.
  Current Opinion in Colloid & Interface Science 10(3):133–140, 2005.
  [PDF] (166 KB) [DOI]
• J. P. Huang, Z. W. Wang, C. Holm.
  Computer simulations of the structure of colloidal ferrofluids.
  Physical Review E 71(6):061203, 2005.
  [PDF] (1.1 MB) [DOI]
• J. P. Huang, Z. Wang, C. Holm.
  Structure and magnetic properties of mono- and bi- dispersed ferrofluids as revealed by simulations.
  Journal of Magnetism and Magnetic Materials 289:234, 2005.
  [PDF] (113 KB) [DOI]
• T. Joseph, R. Helmig, R. Hilfer.
  Effects of Heterogeneity on Upscaling of Two Phase Flow in Anisotropic Porous Media.
  Physical Review E submitted:preprint, 2005.
  
• F. Kun, F. K. Wittel, H. J. Herrmann, B. H. Kröplin.
  Scaling laws of fragment shapes.
  2005.
  [Preprint]
• J. H. Lee, A. O. Sousa, E. J. R. Parteli, H. J. Herrmann.
  Modelling formation and evolution of transverse dune fields.
  International Journal of Modern Physics C 12(16):1879–1892, 2005.
  [Preprint] [DOI]
• Hans Jörg Limbach, Kurt Kremer, Christian Holm.
  Computer Simulations of the “Hairy Rod” model.
  Macromolecular Chemistry and Physics 206:77–82, 2005.
  [PDF] (209 KB) [DOI]
• P. G. Lind, Jason A. C. Gallas.
  Inducing periodicity in lattices of chaotic maps with advection.
  Physica Scripta T118:143–147, 2005.
  [Preprint]
• P. G. Lind, M. C. Gonzaléz.
  Cycles and clustering in bipartite networks.
  Physical Review E 72:056127, 2005.
  [PDF] (186 KB)
• P. G. Lind, A. Mora, Jason A. C. Gallas, M. Haase.
  Reducing stochasticity in the North Atlantic Oscillation index with coupled Langevin equations.
  Physical Review E 72:056706, 2005.
  [PDF] (1.5 MB)
• S. Luding, K. Manetsberger, J. Muellers.
  A discrete model for long time sintering.
  Journal of the Mechanics and Physics of Solids 53(2):455–491, 2005.
  [PDF] (946 KB)
• Bernward A. Mann, Christian Holm, Kurt Kremer.
  Swelling of Polyelectrolyte Networks.
  The Journal of Chemical Physics 122(15):154903, 2005.
  [PDF] (811 KB) [DOI]
• S. McNamara, R. García-Rojo, H. J. Herrmann.
  Indeterminacy and the Onset of Motion in a Simple Granular Packing.
  Physical Review E 72:021304, 2005.
  [PDF] (145 KB) [Preprint]
• S. McNamara, R. García-Rojo, H. J. Herrmann.
  The stress-strain curve of cyclic loading: microscopic, analytical results.
  In Proceedings of Powders and Grains 2005, pages 295–299. Edited by R. Garcia-Rojo, H. J. Herrmann, S. McNamara.
  Balkema, Leiden, 2005.
  [PDF] (147 KB)
• F. Osanloo, S. McNamara, H. J. Herrmann.
  A simple model of sediment transport.
  In Proceedings of Powders and Grains 2005, pages 1005–1008. Edited by R. Garcia-Rojo, H. J. Herrmann, S. McNamara.
  Balkema, Leiden, 2005.
  [PDF] (214 KB)
• E. J. R. Parteli.
  Das sich entziehende Land - Zur Physik der Düne und des Treibsands.
  In Niemandsland - Topographische Ausflüge zwischen Wissenschaft und Kunst, pages 44–49. Edited by J. Badura, S. Schmidt.
  Universität Stuttgart, 2005.
  [PDF] (276 KB)
• E. J. R. Parteli, M. A. F. Gomes, V. P. Brito.
  Nontrivial temporal scaling in a Galilean stick-slip dynamics.
  Physical Review E 71:036137, 2005.
  [PDF] (91 KB)
• E. J. R. Parteli, V. Schatz, H. J. Herrmann.
  Barchan dunes on Mars and on Earth.
  In Proceedings of Powders and Grains 2005, pages 959–962. Edited by H. J. Herrmann R. Garcia-Rojo, S. McNamara.
  Balkema, Leiden, 2005.
  [PDF] (343 KB)
• A. A. Peña, A. Lizcano, F. Alonso-Marroquin, H. J. Herrmann.
  Investigation of the asymptotic states of granular materials using a discrete model of anisotropic particles.
  In Proceedings of Powders and Grains 2005, pages 697–700. Volume 1.
  Balkema, 2005.
  
• F. Raischel, F. Kun, H. J. Herrmann.
  Failure process of a bundle of plastic fibers.
  2005.
  [Preprint]
• F. Raischel, F. Kun, H. J. Herrmann.
  Simple beam model for the shear failure of interfaces.
  Physical Review E 72:046126, 2005.
  [PDF] (696 KB) [Preprint]
• P. C. Rech, M. W. Beims, Jason A. C. Gallas.
  Basin size evolution between dissipative and conservative limits.
  Physical Review E 71:017202, 2005.
  [PDF] (292 KB)
• A. S. Ribeiro, P. G. Lind.
  Effects of lattice structure in the dynamics of coupled elements.
  Physica Scripta T118:165–167, 2005.
  [PDF] (101 KB)
• V. Schatz, H. J. Herrmann.
  Flow separation in the lee of transverse dunes.
  In Proceedings of Powders and Grains 2005, pages 955–958. Edited by R. Garcia-Rojo, H. J. Herrmann, S. McNamara.
  Balkema, Leiden, 2005.
  [Preprint]
• V. Schwämmle.
  Simulation for competition of languages with an ageing sexual population.
  International Journal of Modern Physics C 16(10):1519–1526, 2005.
  [DOI]
• V. Schwämmle, H. J. Herrmann.
  A model of Barchan dunes including lateral shear stress.
  European Physical Journal E 16:57–65, 2005.
  [Preprint]
• V. Schwämmle, H. J. Herrmann.
  Reply to the discussion on “Barchan Dunes: why they cannot be treated as ‘solitons’ or ‘solitary waves’”.
  Earth Surface Processes and Landforms 30:517, 2005.
  
• V. Schwämmle, S. M. de Oliveira.
  Simulations of a mortality plateau in the sexual Penna model for biological ageing.
  Physical Review E 72:031911, 2005.
  [Preprint]
• H. J. Seybold, R. Hilfer.
  Numerical Results for the Generalized Mittag-Leffler Function.
  Fractional Calculus and Applied Analysis 8(2):127, 2005.
  [PDF] (932 KB)
• Sandeep Tyagi.
  New series representation for the Madelung constant.
  Progress of Theoretical Physics 114(3):517–521, 2005.
  [PDF] (100 KB) [DOI]
• Sandeep Tyagi.
  Rapid evaluation of the periodic Green function in d dimensions.
  Journal of Physics A 38:6987–6998, 2005.
  [PDF] (152 KB)
• M. Wackenhut, H. J. Herrmann.
  The reversible polydisperse parking lot model.
  Physical Review E 68:041303, 2005.
  [Preprint]
• M. Wackenhut, S. McNamara, H. J. Herrmann.
  A hierarchical model for simulating very polydisperse granular media.
  In Proceedings of Powders and Grains 2005, pages 1311–1315. Edited by R. Garcia-Rojo, H. J. Herrmann, S. McNamara.
  Balkema, Leiden, 2005.
  [PDF] (219 KB)
• M. Wackenhut, S. McNamara, H. J. Herrmann.
  Shearing behaviour of polydisperse media.
  European Physical Journal E 17:237–246, 2005.
  [Preprint]
• F. K. Wittel, F. Kun, H. J. Herrmann, B. H. Kröplin.
  Break-up of shells under explosion and impact.
  Physical Review E 71:016108, 2005.
  [PDF] (1005 KB)