Difference between revisions of "Jens Smiatek"

From ICPWiki
Jump to navigation Jump to search
Line 38: Line 38:
* Method development
* Method development
== Lectures - Material ==
''Simulationsmethoden fuer Master-Studierende B (SS 2015)''
*'''[[Media:SimTech_WS1.zip|Worksheet 1 (zip-File with input files for GROMACS)]]''' ''Diffusion processes and properties of atomistic water models''
** [[Media:ws1_Simtech.pdf|Worksheet 1 (work sheet as a single PDF file)]]
** [http://www.gromacs.org GROMACS Download]
** [http://www.csc.fi/english/csc/courses/archive/material/gmx-gpu-materials/vmd-gromacs-exercises.pdf How to visualize GROMACS trajectories with VMD]
== Publications ==
== Publications ==

Revision as of 12:27, 20 May 2015

Jens neu1.jpg
Dr. Jens Smiatek
Group leader
Phone:+49 711 685-63757
Fax:+49 711 685-63658
Email:smiatek _at_ icp.uni-stuttgart.de
Address:Dr. Jens Smiatek
Institute for Computational Physics
Universität Stuttgart
Allmandring 3
70569 Stuttgart

Research interests

  • Specific DNA structures: i-motif and g-quadruplex
  • Protein folding
  • Hydrophobic hydration
  • Free energy landscapes
  • Influence of solvent properties on structure formation (solvent-solute interactions)
  • Influence of osmolytes on water structure
  • Electrohydrodynamics
  • Polyelectrolytes and interactions with ions
  • Microscale flows
  • Method development


My profile at "Scholar Google"

Submitted Manuscripts

  • Fahrenberger, F.; Hickey, O. A.; Smiatek, J.; Holm, C.
    The Importance of Varying Permittivity on the Conductivity of Polyelectrolyte Solutions, submitted (2015)
  • Vögele, M.; Holm, C.; Smiatek, J.
    Properties of the Polarizable MARTINI Water Model: A Comparative Study for Aqueous Electrolyte Solutions, submitted (2015)
  • Smiatek, J.; Riedl, D.; Heuer, A.
    Statistical properties of soccer, basketball and handball - A quantitative comparison, submitted (2015)
  • Vögele, M.; Holm, C.; Smiatek, J.
    Coarse-Grained Simulations of Polyelectrolyte Complexes: MARTINI Based Models for Poly(styrene sulfonate) and Poly(diallyldimethylammonium), submitted (2015)
  • Smiatek, J.
    Two sides of one coin - High and low concentrated aqueous urea solutions around differently charged spheres, submitted (2015)


  • High temperature unfolding dynamics of a single-stranded deprotonated DNA i-motif